Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
AP1S2P56377 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.07■□□□□ 0.16
AP1S2P56377 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.07■□□□□ 0.16
AP1S2P56377 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
AP1S2P56377 AL078644.1-201ENST00000609881 752 ntBASIC16.07■□□□□ 0.16
AP1S2P56377 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.07■□□□□ 0.16
AP1S2P56377 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
AP1S2P56377 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.07■□□□□ 0.16
AP1S2P56377 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
AP1S2P56377 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.07■□□□□ 0.16
AP1S2P56377 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.07■□□□□ 0.16
AP1S2P56377 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.07■□□□□ 0.16
AP1S2P56377 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
AP1S2P56377 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
AP1S2P56377 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.06■□□□□ 0.16
AP1S2P56377 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
AP1S2P56377 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 U82695.1-201ENST00000635752 1889 ntBASIC16.06■□□□□ 0.16
AP1S2P56377 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
AP1S2P56377 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S2P56377 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
AP1S2P56377 AC112191.1-201ENST00000523689 701 ntBASIC16.06■□□□□ 0.16
AP1S2P56377 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
AP1S2P56377 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.06■□□□□ 0.16
AP1S2P56377 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 AC046158.3-201ENST00000624947 2558 ntBASIC16.06■□□□□ 0.16
AP1S2P56377 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
AP1S2P56377 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
AP1S2P56377 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
AP1S2P56377 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S2P56377 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S2P56377 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 WASH6P-202ENST00000359512 1437 ntBASIC16.05■□□□□ 0.16
AP1S2P56377 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
AP1S2P56377 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.05■□□□□ 0.16
AP1S2P56377 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
AP1S2P56377 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 AL513190.1-201ENST00000621254 727 ntBASIC16.05■□□□□ 0.16
AP1S2P56377 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
AP1S2P56377 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.05■□□□□ 0.16
AP1S2P56377 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
AP1S2P56377 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms