Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH13P55290 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH13P55290 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH13P55290 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH13P55290 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH13P55290 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.18■□□□□ 0.18
CDH13P55290 AC005412.3-201ENST00000580309 715 ntBASIC16.18■□□□□ 0.18
CDH13P55290 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.18■□□□□ 0.18
CDH13P55290 AP001350.2-201ENST00000625104 1094 ntBASIC16.18■□□□□ 0.18
CDH13P55290 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH13P55290 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH13P55290 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDH13P55290 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH13P55290 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH13P55290 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH13P55290 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.18■□□□□ 0.18
CDH13P55290 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH13P55290 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH13P55290 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH13P55290 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.18■□□□□ 0.18
CDH13P55290 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH13P55290 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH13P55290 AP002414.3-201ENST00000589352 1468 ntBASIC16.17■□□□□ 0.18
CDH13P55290 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CDH13P55290 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.17■□□□□ 0.18
CDH13P55290 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH13P55290 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH13P55290 EMBP1-201ENST00000458200 901 ntBASIC16.17■□□□□ 0.18
CDH13P55290 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 KRT18P56-201ENST00000507275 550 ntBASIC16.17■□□□□ 0.18
CDH13P55290 IGHV3-65-201ENST00000523210 341 ntBASIC16.17■□□□□ 0.18
CDH13P55290 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.17■□□□□ 0.18
CDH13P55290 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH13P55290 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH13P55290 AC012640.2-201ENST00000561606 901 ntBASIC16.17■□□□□ 0.18
CDH13P55290 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.17■□□□□ 0.18
CDH13P55290 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 AC008735.5-201ENST00000623544 497 ntBASIC16.17■□□□□ 0.18
CDH13P55290 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.17■□□□□ 0.18
CDH13P55290 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.17■□□□□ 0.18
CDH13P55290 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDH13P55290 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDH13P55290 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDH13P55290 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.16■□□□□ 0.18
CDH13P55290 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
CDH13P55290 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH13P55290 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDH13P55290 FAM197Y8-203ENST00000450145 560 ntBASIC16.16■□□□□ 0.18
CDH13P55290 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDH13P55290 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH13P55290 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH13P55290 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.16■□□□□ 0.18
CDH13P55290 AL356488.2-201ENST00000602755 427 ntBASIC16.16■□□□□ 0.18
CDH13P55290 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.16■□□□□ 0.18
CDH13P55290 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDH13P55290 AC010654.1-201ENST00000615722 808 ntBASIC16.16■□□□□ 0.18
CDH13P55290 MIR1199-201ENST00000621445 119 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms