Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH4P55283 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.81■□□□□ 0.28
CDH4P55283 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.81■□□□□ 0.28
CDH4P55283 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CDH4P55283 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDH4P55283 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDH4P55283 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH4P55283 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH4P55283 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH4P55283 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.8■□□□□ 0.28
CDH4P55283 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH4P55283 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH4P55283 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.8■□□□□ 0.28
CDH4P55283 AC015911.4-201ENST00000588022 1070 ntBASIC16.8■□□□□ 0.28
CDH4P55283 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.8■□□□□ 0.28
CDH4P55283 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH4P55283 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH4P55283 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH4P55283 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.8■□□□□ 0.28
CDH4P55283 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDH4P55283 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH4P55283 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CDH4P55283 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDH4P55283 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH4P55283 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 CNN2P2-201ENST00000443536 909 ntBASIC16.79■□□□□ 0.28
CDH4P55283 CNN2P3-201ENST00000450201 906 ntBASIC16.79■□□□□ 0.28
CDH4P55283 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 RNA5SP410-201ENST00000516285 106 ntBASIC16.79■□□□□ 0.28
CDH4P55283 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH4P55283 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.79■□□□□ 0.28
CDH4P55283 AC024267.1-201ENST00000582320 895 ntBASIC16.79■□□□□ 0.28
CDH4P55283 AC018529.1-201ENST00000613063 361 ntBASIC16.79■□□□□ 0.28
CDH4P55283 AL136317.3-201ENST00000618497 906 ntBASIC16.79■□□□□ 0.28
CDH4P55283 Z92544.3-201ENST00000624747 417 ntBASIC16.79■□□□□ 0.28
CDH4P55283 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDH4P55283 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDH4P55283 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.79■□□□□ 0.28
CDH4P55283 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.79■□□□□ 0.28
CDH4P55283 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDH4P55283 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.78■□□□□ 0.28
CDH4P55283 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDH4P55283 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDH4P55283 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH4P55283 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.78■□□□□ 0.28
CDH4P55283 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH4P55283 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms