Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 AC010491.1-201ENST00000563101 2797 ntBASIC15.66■□□□□ 0.1
CASP9P55211 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 FAM197Y8-203ENST00000450145 560 ntBASIC15.66■□□□□ 0.1
CASP9P55211 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.66■□□□□ 0.1
CASP9P55211 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CASP9P55211 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 KRT8P39-201ENST00000396270 1433 ntBASIC15.66■□□□□ 0.1
CASP9P55211 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 AP003680.1-201ENST00000598970 3660 ntBASIC15.66■□□□□ 0.1
CASP9P55211 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.66■□□□□ 0.1
CASP9P55211 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CASP9P55211 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.65■□□□□ 0.1
CASP9P55211 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CASP9P55211 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.65■□□□□ 0.1
CASP9P55211 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 KRT18P27-201ENST00000427733 1299 ntBASIC15.65■□□□□ 0.1
CASP9P55211 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
CASP9P55211 CYP2A7P1-201ENST00000595391 815 ntBASIC15.65■□□□□ 0.1
CASP9P55211 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 AL139011.1-202ENST00000642063 584 ntBASIC15.65■□□□□ 0.1
CASP9P55211 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 AL596087.1-201ENST00000400979 1969 ntBASIC15.65■□□□□ 0.1
CASP9P55211 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CASP9P55211 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CASP9P55211 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.65■□□□□ 0.1
CASP9P55211 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CASP9P55211 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
CASP9P55211 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CASP9P55211 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms