Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
ATP1B3P54709 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.38□□□□□ -0.11
ATP1B3P54709 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.38□□□□□ -0.11
ATP1B3P54709 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.38□□□□□ -0.11
ATP1B3P54709 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ATP1B3P54709 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ATP1B3P54709 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.38□□□□□ -0.11
ATP1B3P54709 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
ATP1B3P54709 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
ATP1B3P54709 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ATP1B3P54709 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.37□□□□□ -0.11
ATP1B3P54709 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.37□□□□□ -0.11
ATP1B3P54709 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.37□□□□□ -0.11
ATP1B3P54709 ME2P1-201ENST00000426028 1970 ntBASIC14.37□□□□□ -0.11
ATP1B3P54709 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.37□□□□□ -0.11
ATP1B3P54709 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
ATP1B3P54709 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ATP1B3P54709 LAGE3P1-201ENST00000425356 484 ntBASIC14.37□□□□□ -0.11
ATP1B3P54709 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.37□□□□□ -0.11
ATP1B3P54709 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.37□□□□□ -0.11
ATP1B3P54709 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.37□□□□□ -0.11
ATP1B3P54709 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.37□□□□□ -0.11
ATP1B3P54709 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.37□□□□□ -0.11
ATP1B3P54709 AC091167.2-201ENST00000579581 588 ntBASIC14.37□□□□□ -0.11
ATP1B3P54709 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 MPDU1-223ENST00000582151 728 ntBASIC14.37□□□□□ -0.11
ATP1B3P54709 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.37□□□□□ -0.11
ATP1B3P54709 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ATP1B3P54709 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.37□□□□□ -0.11
ATP1B3P54709 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
ATP1B3P54709 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ATP1B3P54709 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
ATP1B3P54709 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ATP1B3P54709 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ATP1B3P54709 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 AC002310.6-201ENST00000624451 1377 ntBASIC14.36□□□□□ -0.11
ATP1B3P54709 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.36□□□□□ -0.11
ATP1B3P54709 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
ATP1B3P54709 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.36□□□□□ -0.11
ATP1B3P54709 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ATP1B3P54709 GGTLC5P-201ENST00000617623 998 ntBASIC14.36□□□□□ -0.11
ATP1B3P54709 AL805961.1-202ENST00000641562 540 ntBASIC14.36□□□□□ -0.11
ATP1B3P54709 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ATP1B3P54709 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.36□□□□□ -0.11
ATP1B3P54709 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms