Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2AP49459 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2AP49459 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2AP49459 AC106795.1-205ENST00000512851 1056 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 AC139887.3-201ENST00000568585 713 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 NKAPP1-205ENST00000585790 367 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2AP49459 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 AC073592.4-201ENST00000623827 446 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 FOS-208ENST00000555686 1496 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2AP49459 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 FLJ38576-201ENST00000623820 2459 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 AC092850.2-201ENST00000623821 2697 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
UBE2AP49459 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
UBE2AP49459 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2AP49459 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2AP49459 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2AP49459 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2AP49459 AC243591.1-201ENST00000452967 1364 ntBASIC10.52□□□□□ -0.73
UBE2AP49459 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
UBE2AP49459 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
UBE2AP49459 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
UBE2AP49459 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC10.51□□□□□ -0.73
UBE2AP49459 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.51□□□□□ -0.73
UBE2AP49459 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2AP49459 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
UBE2AP49459 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
UBE2AP49459 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2AP49459 AL589182.2-201ENST00000619332 1049 ntBASIC10.51□□□□□ -0.73
UBE2AP49459 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.51□□□□□ -0.73
UBE2AP49459 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
UBE2AP49459 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
UBE2AP49459 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms