Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.06■□□□□ 0.48
USP8P40818 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USP8P40818 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.06■□□□□ 0.48
USP8P40818 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
USP8P40818 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USP8P40818 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.06■□□□□ 0.48
USP8P40818 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP8P40818 AC092364.2-201ENST00000596710 2692 ntBASIC18.06■□□□□ 0.48
USP8P40818 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.05■□□□□ 0.48
USP8P40818 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
USP8P40818 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP8P40818 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 TPM4P1-201ENST00000436100 807 ntBASIC18.05■□□□□ 0.48
USP8P40818 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
USP8P40818 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.05■□□□□ 0.48
USP8P40818 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.05■□□□□ 0.48
USP8P40818 IGHV3-65-201ENST00000523210 341 ntBASIC18.05■□□□□ 0.48
USP8P40818 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 AC004790.2-201ENST00000623588 572 ntBASIC18.05■□□□□ 0.48
USP8P40818 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.05■□□□□ 0.48
USP8P40818 AC117500.6-201ENST00000624871 588 ntBASIC18.05■□□□□ 0.48
USP8P40818 PGM5P2-202ENST00000637225 1043 ntBASIC18.05■□□□□ 0.48
USP8P40818 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP8P40818 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.05■□□□□ 0.48
USP8P40818 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP8P40818 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.05■□□□□ 0.48
USP8P40818 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.05■□□□□ 0.48
USP8P40818 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.04■□□□□ 0.48
USP8P40818 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.04■□□□□ 0.48
USP8P40818 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.04■□□□□ 0.48
USP8P40818 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP8P40818 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.04■□□□□ 0.48
USP8P40818 PMS2P1-201ENST00000431037 1228 ntBASIC18.04■□□□□ 0.48
USP8P40818 AC108073.2-201ENST00000464002 357 ntBASIC18.04■□□□□ 0.48
USP8P40818 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.04■□□□□ 0.48
USP8P40818 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.04■□□□□ 0.48
USP8P40818 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.04■□□□□ 0.48
USP8P40818 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.04■□□□□ 0.48
USP8P40818 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.04■□□□□ 0.48
USP8P40818 AC013467.2-201ENST00000605472 835 ntBASIC18.04■□□□□ 0.48
USP8P40818 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.04■□□□□ 0.48
USP8P40818 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.04■□□□□ 0.48
USP8P40818 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.04■□□□□ 0.48
USP8P40818 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 AC023824.1-201ENST00000562945 2975 ntBASIC18.04■□□□□ 0.48
USP8P40818 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
USP8P40818 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 AC006538.1-201ENST00000567905 1585 ntBASIC18.04■□□□□ 0.48
USP8P40818 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP8P40818 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP8P40818 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP8P40818 AC131009.4-201ENST00000624048 1740 ntBASIC18.03■□□□□ 0.48
USP8P40818 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
USP8P40818 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.03■□□□□ 0.48
USP8P40818 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP8P40818 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
USP8P40818 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms