Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GGTLC5P-201ENST00000617623 998 ntBASIC16.29■□□□□ 0.2
VARSP26640 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.29■□□□□ 0.2
VARSP26640 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.29■□□□□ 0.2
VARSP26640 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARSP26640 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARSP26640 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARSP26640 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARSP26640 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.29■□□□□ 0.2
VARSP26640 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARSP26640 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.29■□□□□ 0.2
VARSP26640 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARSP26640 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VARSP26640 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VARSP26640 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VARSP26640 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
VARSP26640 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
VARSP26640 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.28■□□□□ 0.2
VARSP26640 AC022188.1-201ENST00000620960 1664 ntBASIC16.28■□□□□ 0.2
VARSP26640 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
VARSP26640 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
VARSP26640 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.28■□□□□ 0.2
VARSP26640 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
VARSP26640 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.28■□□□□ 0.2
VARSP26640 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.28■□□□□ 0.2
VARSP26640 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 AC108073.2-201ENST00000464002 357 ntBASIC16.28■□□□□ 0.2
VARSP26640 AC107918.2-201ENST00000530817 355 ntBASIC16.28■□□□□ 0.2
VARSP26640 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.28■□□□□ 0.2
VARSP26640 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.28■□□□□ 0.2
VARSP26640 AC004790.2-201ENST00000623588 572 ntBASIC16.28■□□□□ 0.2
VARSP26640 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.28■□□□□ 0.2
VARSP26640 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
VARSP26640 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
VARSP26640 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VARSP26640 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.28■□□□□ 0.2
VARSP26640 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
VARSP26640 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.27■□□□□ 0.2
VARSP26640 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
VARSP26640 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
VARSP26640 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.27■□□□□ 0.2
VARSP26640 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 LINC00895-201ENST00000629028 1637 ntBASIC16.27■□□□□ 0.2
VARSP26640 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.27■□□□□ 0.2
VARSP26640 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.27■□□□□ 0.2
VARSP26640 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
VARSP26640 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.27■□□□□ 0.2
VARSP26640 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.27■□□□□ 0.2
VARSP26640 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
VARSP26640 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
VARSP26640 AC055717.3-201ENST00000622967 595 ntBASIC16.27■□□□□ 0.2
VARSP26640 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.27■□□□□ 0.2
VARSP26640 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.27■□□□□ 0.2
VARSP26640 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.27■□□□□ 0.2
VARSP26640 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.27■□□□□ 0.2
VARSP26640 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
VARSP26640 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VARSP26640 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
VARSP26640 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.27■□□□□ 0.19
VARSP26640 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
VARSP26640 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
VARSP26640 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARSP26640 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
VARSP26640 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms