Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NR4A1P22736 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.42■□□□□ 0.06
NR4A1P22736 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.42■□□□□ 0.06
NR4A1P22736 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.42■□□□□ 0.06
NR4A1P22736 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.42■□□□□ 0.06
NR4A1P22736 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.42■□□□□ 0.06
NR4A1P22736 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.42■□□□□ 0.06
NR4A1P22736 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.42■□□□□ 0.06
NR4A1P22736 AL138831.2-201ENST00000606564 490 ntBASIC15.42■□□□□ 0.06
NR4A1P22736 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NR4A1P22736 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NR4A1P22736 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
NR4A1P22736 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.42■□□□□ 0.06
NR4A1P22736 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.42■□□□□ 0.06
NR4A1P22736 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
NR4A1P22736 PRAL-201ENST00000624952 3286 ntBASIC15.42■□□□□ 0.06
NR4A1P22736 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NR4A1P22736 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR4A1P22736 AC125634.1-201ENST00000438758 1403 ntBASIC15.42■□□□□ 0.06
NR4A1P22736 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 MTHFR-217ENST00000641820 1569 ntBASIC15.41■□□□□ 0.06
NR4A1P22736 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 TSPY19P-201ENST00000418461 509 ntBASIC15.41■□□□□ 0.06
NR4A1P22736 AL450487.1-201ENST00000426799 995 ntBASIC15.41■□□□□ 0.06
NR4A1P22736 TSPY18P-201ENST00000441642 509 ntBASIC15.41■□□□□ 0.06
NR4A1P22736 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.41■□□□□ 0.06
NR4A1P22736 KRT16P4-201ENST00000453883 522 ntBASIC15.41■□□□□ 0.06
NR4A1P22736 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 AC009533.2-201ENST00000543664 586 ntBASIC15.41■□□□□ 0.06
NR4A1P22736 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.41■□□□□ 0.06
NR4A1P22736 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 AC138894.3-201ENST00000603787 634 ntBASIC15.41■□□□□ 0.06
NR4A1P22736 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.41■□□□□ 0.06
NR4A1P22736 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NR4A1P22736 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR4A1P22736 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NR4A1P22736 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.4■□□□□ 0.06
NR4A1P22736 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR4A1P22736 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.4■□□□□ 0.06
NR4A1P22736 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NR4A1P22736 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.4■□□□□ 0.06
NR4A1P22736 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.4■□□□□ 0.06
NR4A1P22736 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.4■□□□□ 0.06
NR4A1P22736 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.4■□□□□ 0.06
NR4A1P22736 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.4■□□□□ 0.06
NR4A1P22736 AC091304.2-201ENST00000564639 760 ntBASIC15.4■□□□□ 0.06
NR4A1P22736 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms