Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.32■□□□□ 0.04
UBL4AP11441 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.32■□□□□ 0.04
UBL4AP11441 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.32■□□□□ 0.04
UBL4AP11441 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.32■□□□□ 0.04
UBL4AP11441 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.32■□□□□ 0.04
UBL4AP11441 MIR4515-201ENST00000584082 81 ntBASIC15.32■□□□□ 0.04
UBL4AP11441 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UBL4AP11441 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UBL4AP11441 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UBL4AP11441 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
UBL4AP11441 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.32■□□□□ 0.04
UBL4AP11441 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.32■□□□□ 0.04
UBL4AP11441 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBL4AP11441 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
UBL4AP11441 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.31■□□□□ 0.04
UBL4AP11441 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 RPL13AP23-201ENST00000480739 586 ntBASIC15.31■□□□□ 0.04
UBL4AP11441 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 AC120114.3-201ENST00000611923 658 ntBASIC15.31■□□□□ 0.04
UBL4AP11441 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.31■□□□□ 0.04
UBL4AP11441 AC010507.1-201ENST00000633895 436 ntBASIC15.31■□□□□ 0.04
UBL4AP11441 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 AL645728.2-201ENST00000641974 660 ntBASIC15.31■□□□□ 0.04
UBL4AP11441 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.31■□□□□ 0.04
UBL4AP11441 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 AL512652.2-201ENST00000625156 1716 ntBASIC15.31■□□□□ 0.04
UBL4AP11441 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.31■□□□□ 0.04
UBL4AP11441 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.31■□□□□ 0.04
UBL4AP11441 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.31■□□□□ 0.04
UBL4AP11441 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBL4AP11441 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
UBL4AP11441 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBL4AP11441 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.3■□□□□ 0.04
UBL4AP11441 AC096734.2-201ENST00000562054 433 ntBASIC15.3■□□□□ 0.04
UBL4AP11441 AC034105.1-201ENST00000563488 319 ntBASIC15.3■□□□□ 0.04
UBL4AP11441 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.3■□□□□ 0.04
UBL4AP11441 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms