Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL805961.1-202ENST00000641562 540 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 AL353732.1-201ENST00000569618 1459 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 PCGF3-213ENST00000620529 1899 ntBASIC14.54□□□□□ -0.08
UBCP0CG48 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
UBCP0CG48 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBCP0CG48 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
UBCP0CG48 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UBCP0CG48 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.53□□□□□ -0.08
UBCP0CG48 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
UBCP0CG48 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.53□□□□□ -0.08
UBCP0CG48 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
UBCP0CG48 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.53□□□□□ -0.08
UBCP0CG48 GPAA1P2-202ENST00000606848 1787 ntBASIC14.53□□□□□ -0.08
UBCP0CG48 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.53□□□□□ -0.08
UBCP0CG48 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
UBCP0CG48 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.53□□□□□ -0.08
UBCP0CG48 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.53□□□□□ -0.08
UBCP0CG48 PTCHD3P3-201ENST00000403073 906 ntBASIC14.53□□□□□ -0.08
UBCP0CG48 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.53□□□□□ -0.08
UBCP0CG48 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.53□□□□□ -0.08
UBCP0CG48 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.53□□□□□ -0.08
UBCP0CG48 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 CYP2A7P1-201ENST00000595391 815 ntBASIC14.53□□□□□ -0.08
UBCP0CG48 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.53□□□□□ -0.08
UBCP0CG48 AL121772.3-201ENST00000610840 674 ntBASIC14.53□□□□□ -0.08
UBCP0CG48 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.53□□□□□ -0.08
UBCP0CG48 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
UBCP0CG48 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBCP0CG48 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.52□□□□□ -0.08
UBCP0CG48 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.52□□□□□ -0.08
UBCP0CG48 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.52□□□□□ -0.08
UBCP0CG48 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
UBCP0CG48 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
UBCP0CG48 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
UBCP0CG48 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
UBCP0CG48 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.52□□□□□ -0.09
UBCP0CG48 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.52□□□□□ -0.09
UBCP0CG48 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.52□□□□□ -0.09
UBCP0CG48 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.52□□□□□ -0.09
UBCP0CG48 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.52□□□□□ -0.09
UBCP0CG48 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.52□□□□□ -0.09
UBCP0CG48 AC006557.2-201ENST00000592985 1240 ntBASIC14.52□□□□□ -0.09
UBCP0CG48 AC008608.2-201ENST00000606089 416 ntBASIC14.52□□□□□ -0.09
UBCP0CG48 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.52□□□□□ -0.09
UBCP0CG48 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.52□□□□□ -0.09
UBCP0CG48 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
UBCP0CG48 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 AC126755.1-201ENST00000525846 6405 ntBASIC14.52□□□□□ -0.09
UBCP0CG48 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.52□□□□□ -0.09
UBCP0CG48 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.52□□□□□ -0.09
UBCP0CG48 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
UBCP0CG48 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBCP0CG48 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.51□□□□□ -0.09
UBCP0CG48 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
UBCP0CG48 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms