Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RB1P06400 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RB1P06400 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RB1P06400 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RB1P06400 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.3■□□□□ 0.36
RB1P06400 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.3■□□□□ 0.36
RB1P06400 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.3■□□□□ 0.36
RB1P06400 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.3■□□□□ 0.36
RB1P06400 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.3■□□□□ 0.36
RB1P06400 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.3■□□□□ 0.36
RB1P06400 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.3■□□□□ 0.36
RB1P06400 SNX29P1-201ENST00000548357 1007 ntBASIC17.3■□□□□ 0.36
RB1P06400 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.3■□□□□ 0.36
RB1P06400 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.3■□□□□ 0.36
RB1P06400 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.3■□□□□ 0.36
RB1P06400 AC025048.3-201ENST00000590609 569 ntBASIC17.3■□□□□ 0.36
RB1P06400 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.3■□□□□ 0.36
RB1P06400 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RB1P06400 AC005702.4-201ENST00000618393 416 ntBASIC17.3■□□□□ 0.36
RB1P06400 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RB1P06400 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RB1P06400 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RB1P06400 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RB1P06400 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RB1P06400 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.3■□□□□ 0.36
RB1P06400 CLK3P2-201ENST00000427566 1453 ntBASIC17.3■□□□□ 0.36
RB1P06400 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RB1P06400 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RB1P06400 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RB1P06400 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
RB1P06400 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 OR6D1P-202ENST00000641007 5290 ntBASIC17.29■□□□□ 0.36
RB1P06400 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.29■□□□□ 0.36
RB1P06400 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.29■□□□□ 0.36
RB1P06400 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.29■□□□□ 0.36
RB1P06400 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.29■□□□□ 0.36
RB1P06400 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.29■□□□□ 0.36
RB1P06400 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 AL512652.2-201ENST00000625156 1716 ntBASIC17.29■□□□□ 0.36
RB1P06400 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.29■□□□□ 0.36
RB1P06400 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.29■□□□□ 0.36
RB1P06400 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RB1P06400 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.28■□□□□ 0.36
RB1P06400 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RB1P06400 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RB1P06400 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RB1P06400 CDC14C-201ENST00000428251 1719 ntBASIC17.28■□□□□ 0.36
RB1P06400 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
RB1P06400 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RB1P06400 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.28■□□□□ 0.36
RB1P06400 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.28■□□□□ 0.36
RB1P06400 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RB1P06400 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.28■□□□□ 0.36
RB1P06400 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RB1P06400 AC010319.3-201ENST00000597028 470 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms