Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AP001269.4-201ENST00000609611 512 ntBASIC14.91□□□□□ -0.02
HLA-DPB1P04440 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AC099063.4-201ENST00000641099 1602 ntBASIC14.91□□□□□ -0.02
HLA-DPB1P04440 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPB1P04440 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 PMPCAP1-201ENST00000508114 1576 ntBASIC14.9□□□□□ -0.02
HLA-DPB1P04440 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 KLF4P1-201ENST00000412782 1185 ntBASIC14.9□□□□□ -0.02
HLA-DPB1P04440 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DPB1P04440 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 GGT4P-201ENST00000623672 1708 ntBASIC14.89□□□□□ -0.03
HLA-DPB1P04440 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 AC006449.6-201ENST00000612330 2296 ntBASIC14.89□□□□□ -0.03
HLA-DPB1P04440 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 DUSP5P1-201ENST00000441325 1139 ntBASIC14.89□□□□□ -0.03
HLA-DPB1P04440 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 DUX4L17-201ENST00000557360 1267 ntBASIC14.89□□□□□ -0.03
HLA-DPB1P04440 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 LINC01711-201ENST00000598340 967 ntBASIC14.89□□□□□ -0.03
HLA-DPB1P04440 IFNL4P1-201ENST00000607083 540 ntBASIC14.89□□□□□ -0.03
HLA-DPB1P04440 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 AP000867.4-201ENST00000641616 219 ntBASIC14.89□□□□□ -0.03
HLA-DPB1P04440 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DPB1P04440 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms