Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 TOP3BP1-201ENST00000420768 1380 ntBASIC15.44■□□□□ 0.06
TRIM3O75382 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRIM3O75382 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 AL513523.2-202ENST00000427283 2040 ntBASIC15.43■□□□□ 0.06
TRIM3O75382 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM3O75382 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM3O75382 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 C20orf181-201ENST00000623918 480 ntBASIC15.43■□□□□ 0.06
TRIM3O75382 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM3O75382 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRIM3O75382 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM3O75382 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM3O75382 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.42■□□□□ 0.06
TRIM3O75382 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM3O75382 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM3O75382 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 AL645728.2-201ENST00000641974 660 ntBASIC15.42■□□□□ 0.06
TRIM3O75382 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.42■□□□□ 0.06
TRIM3O75382 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 AC099063.4-201ENST00000641099 1602 ntBASIC15.42■□□□□ 0.06
TRIM3O75382 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRIM3O75382 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms