Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 AC126755.1-201ENST00000525846 6405 ntBASIC14.67□□□□□ -0.06
GMDSO60547 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.67□□□□□ -0.06
GMDSO60547 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.67□□□□□ -0.06
GMDSO60547 AP002490.2-201ENST00000524791 560 ntBASIC14.67□□□□□ -0.06
GMDSO60547 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 AL353135.1-201ENST00000606729 504 ntBASIC14.67□□□□□ -0.06
GMDSO60547 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GMDSO60547 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.67□□□□□ -0.06
GMDSO60547 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GMDSO60547 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.66□□□□□ -0.06
GMDSO60547 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.66□□□□□ -0.06
GMDSO60547 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GMDSO60547 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GMDSO60547 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.66□□□□□ -0.06
GMDSO60547 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 RPS2P28-201ENST00000314255 741 ntBASIC14.66□□□□□ -0.06
GMDSO60547 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.66□□□□□ -0.06
GMDSO60547 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.66□□□□□ -0.06
GMDSO60547 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GMDSO60547 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.66□□□□□ -0.06
GMDSO60547 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.66□□□□□ -0.06
GMDSO60547 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
GMDSO60547 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 RN7SL510P-201ENST00000581311 263 ntBASIC14.66□□□□□ -0.06
GMDSO60547 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 AC064862.7-201ENST00000604520 867 ntBASIC14.66□□□□□ -0.06
GMDSO60547 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.66□□□□□ -0.06
GMDSO60547 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GMDSO60547 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
GMDSO60547 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GMDSO60547 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms