Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.43■□□□□ 0.86
SRGAP3O43295 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 KRT18P28-201ENST00000453838 1332 ntBASIC20.43■□□□□ 0.86
SRGAP3O43295 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SRGAP3O43295 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SRGAP3O43295 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRGAP3O43295 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRGAP3O43295 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.42■□□□□ 0.86
SRGAP3O43295 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.42■□□□□ 0.86
SRGAP3O43295 RBPMS2P1-201ENST00000437762 623 ntBASIC20.42■□□□□ 0.86
SRGAP3O43295 POU5F1P6-201ENST00000466990 990 ntBASIC20.42■□□□□ 0.86
SRGAP3O43295 HLA-J-203ENST00000494367 1087 ntBASIC20.42■□□□□ 0.86
SRGAP3O43295 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.42■□□□□ 0.86
SRGAP3O43295 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRGAP3O43295 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.42■□□□□ 0.86
SRGAP3O43295 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.42■□□□□ 0.86
SRGAP3O43295 SPTSSB-204ENST00000617024 1292 ntBASIC20.42■□□□□ 0.86
SRGAP3O43295 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRGAP3O43295 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.42■□□□□ 0.86
SRGAP3O43295 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 AL589702.1-201ENST00000641229 1509 ntBASIC20.42■□□□□ 0.86
SRGAP3O43295 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SRGAP3O43295 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SRGAP3O43295 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRGAP3O43295 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 METTL21AP1-201ENST00000438852 635 ntBASIC20.41■□□□□ 0.86
SRGAP3O43295 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 AC109322.1-201ENST00000524499 1264 ntBASIC20.41■□□□□ 0.86
SRGAP3O43295 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.41■□□□□ 0.86
SRGAP3O43295 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SRGAP3O43295 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SRGAP3O43295 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRGAP3O43295 PCDH8P1-201ENST00000428983 2773 ntBASIC20.4■□□□□ 0.86
SRGAP3O43295 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SRGAP3O43295 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SRGAP3O43295 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 AC098859.1-201ENST00000502915 1238 ntBASIC20.4■□□□□ 0.86
SRGAP3O43295 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.4■□□□□ 0.86
SRGAP3O43295 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.4■□□□□ 0.86
SRGAP3O43295 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 LINC00628-201ENST00000628516 1289 ntBASIC20.4■□□□□ 0.86
SRGAP3O43295 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRGAP3O43295 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
SRGAP3O43295 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC20.4■□□□□ 0.86
SRGAP3O43295 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms