Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDC7O00311 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC7O00311 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.2■□□□□ 0.18
CDC7O00311 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CDC7O00311 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC7O00311 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 AC005622.1-201ENST00000636801 1703 ntBASIC16.2■□□□□ 0.18
CDC7O00311 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC7O00311 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC7O00311 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDC7O00311 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC7O00311 AC034105.1-201ENST00000563488 319 ntBASIC16.2■□□□□ 0.18
CDC7O00311 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.2■□□□□ 0.18
CDC7O00311 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC7O00311 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC7O00311 AC021097.1-201ENST00000607902 574 ntBASIC16.2■□□□□ 0.18
CDC7O00311 PAUPAR-201ENST00000630360 2965 ntBASIC16.2■□□□□ 0.18
CDC7O00311 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CDC7O00311 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDC7O00311 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC7O00311 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDC7O00311 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 AL365203.3-201ENST00000609742 2057 ntBASIC16.19■□□□□ 0.18
CDC7O00311 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.19■□□□□ 0.18
CDC7O00311 AC018845.2-201ENST00000568326 409 ntBASIC16.19■□□□□ 0.18
CDC7O00311 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.19■□□□□ 0.18
CDC7O00311 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 AC046158.3-201ENST00000624947 2558 ntBASIC16.19■□□□□ 0.18
CDC7O00311 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDC7O00311 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.19■□□□□ 0.18
CDC7O00311 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.18■□□□□ 0.18
CDC7O00311 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 AC022188.1-201ENST00000620960 1664 ntBASIC16.18■□□□□ 0.18
CDC7O00311 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 AC010491.1-201ENST00000563101 2797 ntBASIC16.18■□□□□ 0.18
CDC7O00311 AL603832.2-201ENST00000566195 2125 ntBASIC16.18■□□□□ 0.18
CDC7O00311 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDC7O00311 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.18■□□□□ 0.18
CDC7O00311 PMS2P4-201ENST00000412466 1052 ntBASIC16.18■□□□□ 0.18
CDC7O00311 AC007967.2-201ENST00000432613 625 ntBASIC16.18■□□□□ 0.18
CDC7O00311 KRT18P2-201ENST00000447938 1258 ntBASIC16.18■□□□□ 0.18
CDC7O00311 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms