Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AC026748.1-201ENST00000624349 3251 ntBASIC14.4□□□□□ -0.1
SHISA3A0PJX4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AC005521.1-201ENST00000393351 872 ntBASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 KRT18P57-201ENST00000443599 1254 ntBASIC14.4□□□□□ -0.1
SHISA3A0PJX4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.4□□□□□ -0.1
SHISA3A0PJX4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AC079776.2-201ENST00000641154 1609 ntBASIC14.4□□□□□ -0.1
SHISA3A0PJX4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AL592424.1-201ENST00000563624 1536 ntBASIC14.4□□□□□ -0.1
SHISA3A0PJX4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHISA3A0PJX4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AC008677.1-201ENST00000519230 1561 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 PMS2P1-201ENST00000431037 1228 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 PAWRP1-201ENST00000451083 565 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AC092647.4-201ENST00000457211 535 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AL671277.2-201ENST00000458060 996 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AC096582.2-201ENST00000510860 516 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 NTF6B-201ENST00000591913 560 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 NCF1C-201ENST00000438382 1427 ntBASIC14.39□□□□□ -0.11
SHISA3A0PJX4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHISA3A0PJX4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHISA3A0PJX4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms