Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.55□□□□□ -0.08
TRDV1A0A1B0GX56 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRDV1A0A1B0GX56 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRDV1A0A1B0GX56 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRDV1A0A1B0GX56 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.55□□□□□ -0.08
TRDV1A0A1B0GX56 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRDV1A0A1B0GX56 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 VENTXP7-201ENST00000475503 772 ntBASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 AP006294.2-201ENST00000641667 209 ntBASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 INTS4P1-201ENST00000438455 1935 ntBASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRDV1A0A1B0GX56 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 AC091607.1-201ENST00000490318 1060 ntBASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 AL353135.1-201ENST00000606729 504 ntBASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRDV1A0A1B0GX56 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.52□□□□□ -0.08
TRDV1A0A1B0GX56 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms