Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 DNAJB3-201ENST00000446806 729 ntBASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AL009183.1-201ENST00000603760 355 ntBASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AL671710.1-201ENST00000610245 2349 ntBASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 RNF216P1-203ENST00000404404 2427 ntBASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PPARGC1AQ9UBK2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 AC092919.2-201ENST00000623631 1645 ntBASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PPARGC1AQ9UBK2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms