Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AC134407.2-201ENST00000625089 1978 ntBASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AC087481.3-201ENST00000602886 1894 ntBASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AL138709.1-201ENST00000614840 1693 ntBASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AC060814.1-201ENST00000554326 538 ntBASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AC112504.1-201ENST00000623415 1841 ntBASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 AC090114.2-201ENST00000608477 7054 ntBASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC8.35□□□□□ -1.07
CDC42SE1Q9NRR8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms