Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AP002383.4-201ENST00000442518 975 ntBASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COMMD4Q9H0A8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 PCDHA3-202ENST00000532566 4594 ntBASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 OR2I1P-209ENST00000641730 5365 ntBASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 AP000550.4-202ENST00000639755 178 ntBASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 AL513477.1-201ENST00000602865 2407 ntBASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 KRT8P39-201ENST00000396270 1433 ntBASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 AL603832.2-201ENST00000566195 2125 ntBASIC14.65□□□□□ -0.06
COMMD4Q9H0A8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.07
COMMD4Q9H0A8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
COMMD4Q9H0A8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 AL031731.1-201ENST00000642131 2094 ntBASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 AL596257.1-201ENST00000641463 2694 ntBASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 NUS1P2-201ENST00000417358 873 ntBASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.64□□□□□ -0.07
COMMD4Q9H0A8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms