Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PGM5P2-202ENST00000637225 1043 ntBASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UPF3BQ9BZI7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 AL031284.1-201ENST00000419297 478 ntBASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 AC098831.1-202ENST00000438821 336 ntBASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 FAM185BP-201ENST00000443595 716 ntBASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 RNA5SP419-201ENST00000515908 135 ntBASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UPF3BQ9BZI7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 AC012569.1-201ENST00000591191 1524 ntBASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 RPS2P28-201ENST00000314255 741 ntBASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 MIR574-201ENST00000385209 96 ntBASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 AC108751.1-201ENST00000490852 363 ntBASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 MIR4751-201ENST00000578027 74 ntBASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UPF3BQ9BZI7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
UPF3BQ9BZI7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms