Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 KRT18P35-201ENST00000510488 1269 ntBASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC025062.2-201ENST00000605477 670 ntBASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SHANK2-AS3Q9BTD1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 RPS15P9-201ENST00000494093 319 ntBASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.73□□□□□ -0.37
SHANK2-AS3Q9BTD1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms