Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HAPLN3Q96S86 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 SPDYE11-202ENST00000450699 704 ntBASIC17.09■□□□□ 0.33
HAPLN3Q96S86 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 SPDYE9P-201ENST00000570642 692 ntBASIC17.09■□□□□ 0.33
HAPLN3Q96S86 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 SPDYE10P-202ENST00000612005 668 ntBASIC17.09■□□□□ 0.33
HAPLN3Q96S86 SPDYE8P-202ENST00000612377 668 ntBASIC17.09■□□□□ 0.33
HAPLN3Q96S86 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
HAPLN3Q96S86 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HAPLN3Q96S86 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 POU5F1P6-201ENST00000466990 990 ntBASIC17.08■□□□□ 0.32
HAPLN3Q96S86 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 AC105339.1-204ENST00000636249 355 ntBASIC17.08■□□□□ 0.32
HAPLN3Q96S86 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HAPLN3Q96S86 ALOX12P2-203ENST00000570921 1945 ntBASIC17.08■□□□□ 0.32
HAPLN3Q96S86 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 AC068418.2-201ENST00000577309 3703 ntBASIC17.07■□□□□ 0.32
HAPLN3Q96S86 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms