Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 AL671277.2-201ENST00000458060 996 ntBASIC13.46□□□□□ -0.25
RAB40CQ96S21 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 TERC-201ENST00000602385 541 ntBASIC13.46□□□□□ -0.25
RAB40CQ96S21 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.46□□□□□ -0.25
RAB40CQ96S21 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB40CQ96S21 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
RAB40CQ96S21 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 AL031731.1-201ENST00000642131 2094 ntBASIC13.46□□□□□ -0.26
RAB40CQ96S21 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB40CQ96S21 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.46□□□□□ -0.26
RAB40CQ96S21 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 AL512652.2-201ENST00000625156 1716 ntBASIC13.45□□□□□ -0.26
RAB40CQ96S21 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 TSPY22P-201ENST00000427496 604 ntBASIC13.45□□□□□ -0.26
RAB40CQ96S21 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 KRT8P39-201ENST00000396270 1433 ntBASIC13.45□□□□□ -0.26
RAB40CQ96S21 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 PMPCAP1-201ENST00000508114 1576 ntBASIC13.45□□□□□ -0.26
RAB40CQ96S21 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB40CQ96S21 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB40CQ96S21 TOP3BP1-201ENST00000420768 1380 ntBASIC13.45□□□□□ -0.26
RAB40CQ96S21 AC243591.1-201ENST00000452967 1364 ntBASIC13.45□□□□□ -0.26
RAB40CQ96S21 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 AL590326.2-201ENST00000625139 305 ntBASIC13.44□□□□□ -0.26
RAB40CQ96S21 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.44□□□□□ -0.26
RAB40CQ96S21 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RAB40CQ96S21 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms