Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 AP003071.4-201ENST00000562276 1284 ntBASIC15.61■□□□□ 0.09
NR1H4Q96RI1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 Z99916.2-201ENST00000604037 246 ntBASIC15.61■□□□□ 0.09
NR1H4Q96RI1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 AL139011.1-202ENST00000642063 584 ntBASIC15.61■□□□□ 0.09
NR1H4Q96RI1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NR1H4Q96RI1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.6■□□□□ 0.09
NR1H4Q96RI1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.6■□□□□ 0.09
NR1H4Q96RI1 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 AL359183.1-201ENST00000623796 2132 ntBASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.59■□□□□ 0.09
NR1H4Q96RI1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NR1H4Q96RI1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms