Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 MEP1AP4-201ENST00000423244 1087 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 RN7SL560P-201ENST00000577943 264 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 PCDHA12-202ENST00000613593 2588 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 AC092068.3-201ENST00000587894 2016 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AC022211.2-201ENST00000585075 2527 ntBASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AC010328.2-201ENST00000597698 1111 ntBASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 MIR326-201ENST00000362220 95 ntBASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CSMD1Q96PZ7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.85□□□□□ -0.19
CSMD1Q96PZ7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms