Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC3BQ96PB8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 UBALD1-205ENST00000590891 2641 ntBASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 GGT3P-204ENST00000453783 1664 ntBASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRC3BQ96PB8 PCDHB18P-201ENST00000524813 2368 ntBASIC16.71■□□□□ 0.26
LRRC3BQ96PB8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC3BQ96PB8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
LRRC3BQ96PB8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 AC078925.2-201ENST00000624013 1973 ntBASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 ELK1P1-201ENST00000485699 580 ntBASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 TPRX2P-201ENST00000535362 881 ntBASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 MIR6069-201ENST00000620069 79 ntBASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.7■□□□□ 0.26
LRRC3BQ96PB8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LRRC3BQ96PB8 MYCLP2-201ENST00000449268 967 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 496.2 ms