Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNX27Q96L92 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SNX27Q96L92 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX27Q96L92 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SNX27Q96L92 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SNX27Q96L92 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SNX27Q96L92 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.75■□□□□ 0.43
SNX27Q96L92 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.75■□□□□ 0.43
SNX27Q96L92 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.75■□□□□ 0.43
SNX27Q96L92 AC140878.1-201ENST00000565277 250 ntBASIC17.75■□□□□ 0.43
SNX27Q96L92 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 AL589702.1-201ENST00000641229 1509 ntBASIC17.75■□□□□ 0.43
SNX27Q96L92 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.75■□□□□ 0.43
SNX27Q96L92 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.75■□□□□ 0.43
SNX27Q96L92 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SNX27Q96L92 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.75■□□□□ 0.43
SNX27Q96L92 LINC01144-201ENST00000626198 1710 ntBASIC17.75■□□□□ 0.43
SNX27Q96L92 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNX27Q96L92 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.75■□□□□ 0.43
SNX27Q96L92 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
SNX27Q96L92 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX27Q96L92 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SNX27Q96L92 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX27Q96L92 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.74■□□□□ 0.43
SNX27Q96L92 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX27Q96L92 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.74■□□□□ 0.43
SNX27Q96L92 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.74■□□□□ 0.43
SNX27Q96L92 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SNX27Q96L92 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.74■□□□□ 0.43
SNX27Q96L92 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX27Q96L92 AC007967.4-201ENST00000614700 386 ntBASIC17.74■□□□□ 0.43
SNX27Q96L92 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX27Q96L92 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.74■□□□□ 0.43
SNX27Q96L92 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNX27Q96L92 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SNX27Q96L92 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SNX27Q96L92 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SNX27Q96L92 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SNX27Q96L92 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SNX27Q96L92 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 MIR943-201ENST00000401286 94 ntBASIC17.73■□□□□ 0.43
SNX27Q96L92 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX27Q96L92 RNA5SP410-201ENST00000516285 106 ntBASIC17.73■□□□□ 0.43
SNX27Q96L92 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.73■□□□□ 0.43
SNX27Q96L92 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.73■□□□□ 0.43
SNX27Q96L92 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.73■□□□□ 0.43
SNX27Q96L92 RN7SL204P-201ENST00000582831 262 ntBASIC17.73■□□□□ 0.43
SNX27Q96L92 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.73■□□□□ 0.43
SNX27Q96L92 AC003101.2-201ENST00000612557 442 ntBASIC17.73■□□□□ 0.43
SNX27Q96L92 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
SNX27Q96L92 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.73■□□□□ 0.43
SNX27Q96L92 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNX27Q96L92 FLJ38576-201ENST00000623820 2459 ntBASIC17.73■□□□□ 0.43
SNX27Q96L92 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SNX27Q96L92 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX27Q96L92 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms