Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM11Q96F44 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM11Q96F44 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM11Q96F44 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM11Q96F44 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
TRIM11Q96F44 AC008894.3-201ENST00000624324 3103 ntBASIC17.48■□□□□ 0.39
TRIM11Q96F44 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM11Q96F44 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM11Q96F44 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM11Q96F44 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 AL513477.1-201ENST00000602865 2407 ntBASIC17.47■□□□□ 0.39
TRIM11Q96F44 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 IGLL3P-201ENST00000412472 434 ntBASIC17.47■□□□□ 0.39
TRIM11Q96F44 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 AC096734.2-201ENST00000562054 433 ntBASIC17.47■□□□□ 0.39
TRIM11Q96F44 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM11Q96F44 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.47■□□□□ 0.39
TRIM11Q96F44 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 MRPL3P1-201ENST00000400109 1033 ntBASIC17.46■□□□□ 0.39
TRIM11Q96F44 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM11Q96F44 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.46■□□□□ 0.39
TRIM11Q96F44 HCG4B-203ENST00000450128 991 ntBASIC17.46■□□□□ 0.39
TRIM11Q96F44 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms