Protein–RNA interactions for Protein: Q96C45

ULK4, Serine/threonine-protein kinase ULK4, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4Q96C45 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ULK4Q96C45 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ULK4Q96C45 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.52■□□□□ 0.24
ULK4Q96C45 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.52■□□□□ 0.24
ULK4Q96C45 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
ULK4Q96C45 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.52■□□□□ 0.24
ULK4Q96C45 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.52■□□□□ 0.24
ULK4Q96C45 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.52■□□□□ 0.24
ULK4Q96C45 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.52■□□□□ 0.24
ULK4Q96C45 AL671883.3-201ENST00000603274 991 ntBASIC16.52■□□□□ 0.24
ULK4Q96C45 AC020765.3-201ENST00000613051 740 ntBASIC16.52■□□□□ 0.24
ULK4Q96C45 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.52■□□□□ 0.24
ULK4Q96C45 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ULK4Q96C45 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ULK4Q96C45 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ULK4Q96C45 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.52■□□□□ 0.23
ULK4Q96C45 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
ULK4Q96C45 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ULK4Q96C45 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 AL031731.1-201ENST00000642131 2094 ntBASIC16.52■□□□□ 0.23
ULK4Q96C45 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ULK4Q96C45 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ULK4Q96C45 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 GGT3P-204ENST00000453783 1664 ntBASIC16.51■□□□□ 0.23
ULK4Q96C45 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ULK4Q96C45 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 AC004832.2-201ENST00000426397 482 ntBASIC16.51■□□□□ 0.23
ULK4Q96C45 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ULK4Q96C45 AC112191.1-201ENST00000523689 701 ntBASIC16.51■□□□□ 0.23
ULK4Q96C45 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.51■□□□□ 0.23
ULK4Q96C45 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 AL161645.1-201ENST00000622716 1255 ntBASIC16.51■□□□□ 0.23
ULK4Q96C45 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ULK4Q96C45 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 GPAA1P2-202ENST00000606848 1787 ntBASIC16.51■□□□□ 0.23
ULK4Q96C45 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ULK4Q96C45 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ULK4Q96C45 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ULK4Q96C45 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ULK4Q96C45 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ULK4Q96C45 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ULK4Q96C45 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.5■□□□□ 0.23
ULK4Q96C45 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ULK4Q96C45 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ULK4Q96C45 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ULK4Q96C45 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ULK4Q96C45 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ULK4Q96C45 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ULK4Q96C45 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.5■□□□□ 0.23
ULK4Q96C45 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 MCCD1P2-201ENST00000423228 335 ntBASIC16.5■□□□□ 0.23
ULK4Q96C45 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.5■□□□□ 0.23
ULK4Q96C45 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.5■□□□□ 0.23
ULK4Q96C45 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.5■□□□□ 0.23
ULK4Q96C45 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ULK4Q96C45 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.5■□□□□ 0.23
ULK4Q96C45 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.5■□□□□ 0.23
ULK4Q96C45 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms