Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
STAG1Q8WVM7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
STAG1Q8WVM7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
STAG1Q8WVM7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
STAG1Q8WVM7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 RBPMS2P1-201ENST00000437762 623 ntBASIC19.38■□□□□ 0.69
STAG1Q8WVM7 SPDYE14P-201ENST00000442619 822 ntBASIC19.38■□□□□ 0.69
STAG1Q8WVM7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STAG1Q8WVM7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 U82695.1-201ENST00000635752 1889 ntBASIC19.37■□□□□ 0.69
STAG1Q8WVM7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 FAM220BP-201ENST00000377689 816 ntBASIC19.37■□□□□ 0.69
STAG1Q8WVM7 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 ALG1L8P-201ENST00000533887 760 ntBASIC19.37■□□□□ 0.69
STAG1Q8WVM7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.37■□□□□ 0.69
STAG1Q8WVM7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 AC084018.2-201ENST00000613093 2607 ntBASIC19.36■□□□□ 0.69
STAG1Q8WVM7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 AP001059.3-201ENST00000619053 235 ntBASIC19.36■□□□□ 0.69
STAG1Q8WVM7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.36■□□□□ 0.69
STAG1Q8WVM7 AP3S2-216ENST00000617003 1561 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms