Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNX31Q8N9S9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 AL356488.2-201ENST00000602755 427 ntBASIC16.36■□□□□ 0.21
SNX31Q8N9S9 GGTLC5P-201ENST00000617623 998 ntBASIC16.36■□□□□ 0.21
SNX31Q8N9S9 AL691432.3-201ENST00000621860 400 ntBASIC16.36■□□□□ 0.21
SNX31Q8N9S9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNX31Q8N9S9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 AP002414.3-201ENST00000589352 1468 ntBASIC16.35■□□□□ 0.21
SNX31Q8N9S9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 RPS2P28-201ENST00000314255 741 ntBASIC16.35■□□□□ 0.21
SNX31Q8N9S9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 AC073621.1-201ENST00000392730 636 ntBASIC16.35■□□□□ 0.21
SNX31Q8N9S9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 AC018712.1-201ENST00000455767 687 ntBASIC16.35■□□□□ 0.21
SNX31Q8N9S9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 AC148477.8-201ENST00000624298 468 ntBASIC16.35■□□□□ 0.21
SNX31Q8N9S9 AC005593.1-201ENST00000624894 515 ntBASIC16.35■□□□□ 0.21
SNX31Q8N9S9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SNX31Q8N9S9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 AC006538.1-201ENST00000567905 1585 ntBASIC16.34■□□□□ 0.21
SNX31Q8N9S9 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.34■□□□□ 0.21
SNX31Q8N9S9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms