Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 KLF2P3-201ENST00000451977 1087 ntBASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 AP3S2-216ENST00000617003 1561 ntBASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCN4BQ8IWT1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 FOXO1B-201ENST00000504678 1527 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 AC022211.2-201ENST00000585075 2527 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 RARRES2P9-201ENST00000565168 469 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 MIR4453-201ENST00000584019 89 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 AC015911.4-201ENST00000588022 1070 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 AC003101.2-201ENST00000612557 442 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 SPTSSB-204ENST00000617024 1292 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 GGT4P-201ENST00000623672 1708 ntBASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.38■□□□□ 0.37
SCN4BQ8IWT1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 MIR943-201ENST00000401286 94 ntBASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 AC107890.1-201ENST00000422478 521 ntBASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 HLA-J-202ENST00000469281 1241 ntBASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 AC051619.7-201ENST00000568314 623 ntBASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 AC005498.2-205ENST00000593218 784 ntBASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCN4BQ8IWT1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms