Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 AC106820.2-201ENST00000563775 3264 ntBASIC17.79■□□□□ 0.44
HERC6Q8IVU3 AC009053.2-201ENST00000563701 2365 ntBASIC17.79■□□□□ 0.44
HERC6Q8IVU3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 AL512343.1-201ENST00000605837 169 ntBASIC17.79■□□□□ 0.44
HERC6Q8IVU3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 MIR4259-201ENST00000584466 101 ntBASIC17.78■□□□□ 0.44
HERC6Q8IVU3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HERC6Q8IVU3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 MYCLP2-201ENST00000449268 967 ntBASIC17.77■□□□□ 0.44
HERC6Q8IVU3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 SERBP1P3-201ENST00000459980 809 ntBASIC17.77■□□□□ 0.44
HERC6Q8IVU3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.77■□□□□ 0.44
HERC6Q8IVU3 SRD5A3P1-201ENST00000603021 949 ntBASIC17.77■□□□□ 0.44
HERC6Q8IVU3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.77■□□□□ 0.44
HERC6Q8IVU3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HERC6Q8IVU3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AC108860.2-201ENST00000562760 2183 ntBASIC17.76■□□□□ 0.43
HERC6Q8IVU3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms