Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 MIR7706-201ENST00000613747 67 ntBASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 PAUPAR-201ENST00000630360 2965 ntBASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 GPAA1P2-202ENST00000606848 1787 ntBASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 PCGF3-213ENST00000620529 1899 ntBASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00346Q8IVM7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 HCG4-201ENST00000418983 998 ntBASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 MIR4751-201ENST00000578027 74 ntBASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 AL773604.1-201ENST00000617417 272 ntBASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00346Q8IVM7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 MTHFR-217ENST00000641820 1569 ntBASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 AL031284.1-201ENST00000419297 478 ntBASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 AP002469.2-201ENST00000531724 424 ntBASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LINC00346Q8IVM7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms