Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 PAUPAR-201ENST00000630360 2965 ntBASIC16.92■□□□□ 0.3
CASC4Q6P4E1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CASC4Q6P4E1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 MIR600HG-201ENST00000449175 5984 ntBASIC16.91■□□□□ 0.3
CASC4Q6P4E1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PMS2P1-201ENST00000431037 1228 ntBASIC16.91■□□□□ 0.3
CASC4Q6P4E1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 AC046158.3-201ENST00000624947 2558 ntBASIC16.91■□□□□ 0.3
CASC4Q6P4E1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CASC4Q6P4E1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.91■□□□□ 0.3
CASC4Q6P4E1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 AC136632.2-201ENST00000512891 861 ntBASIC16.9■□□□□ 0.3
CASC4Q6P4E1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.9■□□□□ 0.3
CASC4Q6P4E1 GGTLC5P-201ENST00000617623 998 ntBASIC16.9■□□□□ 0.3
CASC4Q6P4E1 MIR1199-201ENST00000621445 119 ntBASIC16.9■□□□□ 0.3
CASC4Q6P4E1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CASC4Q6P4E1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.89■□□□□ 0.3
CASC4Q6P4E1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.89■□□□□ 0.3
CASC4Q6P4E1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CASC4Q6P4E1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.89■□□□□ 0.3
CASC4Q6P4E1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CASC4Q6P4E1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
CASC4Q6P4E1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CASC4Q6P4E1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CASC4Q6P4E1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms