Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 AL135999.2-201ENST00000622438 1686 ntBASIC12.53□□□□□ -0.4
MRPL54Q6P161 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
MRPL54Q6P161 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.53□□□□□ -0.4
MRPL54Q6P161 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.53□□□□□ -0.4
MRPL54Q6P161 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL54Q6P161 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL54Q6P161 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
MRPL54Q6P161 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL54Q6P161 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL54Q6P161 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
MRPL54Q6P161 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL54Q6P161 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL54Q6P161 AC006486.2-201ENST00000624246 2199 ntBASIC12.52□□□□□ -0.4
MRPL54Q6P161 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
MRPL54Q6P161 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 ID1-201ENST00000376105 1233 ntBASIC12.52□□□□□ -0.41
MRPL54Q6P161 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 AP005242.2-201ENST00000580065 1175 ntBASIC12.52□□□□□ -0.41
MRPL54Q6P161 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
MRPL54Q6P161 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
MRPL54Q6P161 SSR4P1-203ENST00000599569 2260 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 HARS-203ENST00000431330 1774 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AC112504.1-201ENST00000623415 1841 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AC007686.3-201ENST00000619017 3487 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AL355802.2-201ENST00000402069 882 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 MTCL1P1-201ENST00000446207 792 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
MRPL54Q6P161 AC142086.2-201ENST00000569753 217 ntBASIC12.51□□□□□ -0.41
MRPL54Q6P161 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.51□□□□□ -0.41
MRPL54Q6P161 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms