Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO1Q2MKA7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO1Q2MKA7 CICP6-201ENST00000457191 2729 ntBASIC14.26□□□□□ -0.13
RSPO1Q2MKA7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RSPO1Q2MKA7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RSPO1Q2MKA7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 AC112504.1-201ENST00000623415 1841 ntBASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 AC002056.1-201ENST00000395613 760 ntBASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 MIR940-201ENST00000401276 94 ntBASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 AL161645.1-201ENST00000622716 1255 ntBASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RSPO1Q2MKA7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 AC092902.6-201ENST00000641783 218 ntBASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 CDC14C-201ENST00000428251 1719 ntBASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO1Q2MKA7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 AL022342.1-201ENST00000400363 863 ntBASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 AP000347.1-202ENST00000435868 847 ntBASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 POLD2P1-201ENST00000511220 997 ntBASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 KRT18P58-201ENST00000527480 1120 ntBASIC14.23□□□□□ -0.13
RSPO1Q2MKA7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms