Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 AC105917.1-201ENST00000506637 2539 ntBASIC14.7□□□□□ -0.06
ODF4Q2M2E3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 AC022188.1-201ENST00000620960 1664 ntBASIC14.7□□□□□ -0.06
ODF4Q2M2E3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ODF4Q2M2E3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 AC010491.1-201ENST00000563101 2797 ntBASIC14.69□□□□□ -0.06
ODF4Q2M2E3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 PRAL-201ENST00000624952 3286 ntBASIC14.69□□□□□ -0.06
ODF4Q2M2E3 NCF1C-201ENST00000438382 1427 ntBASIC14.69□□□□□ -0.06
ODF4Q2M2E3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 NKAPP1-205ENST00000585790 367 ntBASIC14.69□□□□□ -0.06
ODF4Q2M2E3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 AP003680.1-201ENST00000598970 3660 ntBASIC14.69□□□□□ -0.06
ODF4Q2M2E3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 AL596087.1-201ENST00000400979 1969 ntBASIC14.69□□□□□ -0.06
ODF4Q2M2E3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 AL365203.3-201ENST00000609742 2057 ntBASIC14.69□□□□□ -0.06
ODF4Q2M2E3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.69□□□□□ -0.06
ODF4Q2M2E3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ODF4Q2M2E3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms