Protein–RNA interactions for Protein: P62273

RPS29, 40S ribosomal protein S29, humanhuman

Known RBP Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P62273 AC004967.1-201ENST00000453589 447 ntBASIC9.35□□□□□ -0.91
RPS29P62273 AC023141.5-201ENST00000458585 616 ntBASIC9.35□□□□□ -0.91
RPS29P62273 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC9.35□□□□□ -0.91
RPS29P62273 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 KRT8P48-201ENST00000515599 1220 ntBASIC9.35□□□□□ -0.91
RPS29P62273 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC9.35□□□□□ -0.91
RPS29P62273 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
RPS29P62273 AC092865.5-201ENST00000545435 363 ntBASIC9.35□□□□□ -0.91
RPS29P62273 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC9.35□□□□□ -0.91
RPS29P62273 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC9.35□□□□□ -0.91
RPS29P62273 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
RPS29P62273 AC243562.2-201ENST00000561247 970 ntBASIC9.35□□□□□ -0.91
RPS29P62273 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC9.35□□□□□ -0.91
RPS29P62273 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC9.35□□□□□ -0.91
RPS29P62273 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC9.35□□□□□ -0.91
RPS29P62273 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 REXO1L8P-201ENST00000604378 1897 ntBASIC9.35□□□□□ -0.91
RPS29P62273 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
RPS29P62273 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 AL035456.1-201ENST00000456064 1369 ntBASIC9.35□□□□□ -0.91
RPS29P62273 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC9.35□□□□□ -0.91
RPS29P62273 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC9.35□□□□□ -0.91
RPS29P62273 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC9.35□□□□□ -0.91
RPS29P62273 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
RPS29P62273 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 PCDHA14-201ENST00000506751 2298 ntBASIC9.34□□□□□ -0.91
RPS29P62273 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC9.34□□□□□ -0.91
RPS29P62273 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC9.34□□□□□ -0.91
RPS29P62273 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 CD82-202ENST00000342935 967 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 MIR1233-2-201ENST00000408138 82 ntBASIC9.34□□□□□ -0.91
RPS29P62273 MIR1233-1-201ENST00000408722 82 ntBASIC9.34□□□□□ -0.91
RPS29P62273 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC9.34□□□□□ -0.91
RPS29P62273 AL627223.1-201ENST00000416693 442 ntBASIC9.34□□□□□ -0.91
RPS29P62273 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC9.34□□□□□ -0.91
RPS29P62273 KRT18P32-201ENST00000424695 1287 ntBASIC9.34□□□□□ -0.91
RPS29P62273 AL353705.2-201ENST00000428243 662 ntBASIC9.34□□□□□ -0.91
RPS29P62273 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC9.34□□□□□ -0.91
RPS29P62273 AC069335.1-201ENST00000489972 472 ntBASIC9.34□□□□□ -0.91
RPS29P62273 AC112482.1-201ENST00000492080 688 ntBASIC9.34□□□□□ -0.91
RPS29P62273 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC9.34□□□□□ -0.91
RPS29P62273 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC9.34□□□□□ -0.91
RPS29P62273 AL512356.2-201ENST00000546955 174 ntBASIC9.34□□□□□ -0.91
RPS29P62273 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC9.34□□□□□ -0.91
RPS29P62273 AC061975.2-201ENST00000581722 295 ntBASIC9.34□□□□□ -0.91
RPS29P62273 AC010327.4-202ENST00000591484 748 ntBASIC9.34□□□□□ -0.91
RPS29P62273 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
RPS29P62273 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
RPS29P62273 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC9.34□□□□□ -0.91
RPS29P62273 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RPS29P62273 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms