Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.3■□□□□ 0.52
LBX1P52954 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.3■□□□□ 0.52
LBX1P52954 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LBX1P52954 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.3■□□□□ 0.52
LBX1P52954 TUBBP5-203ENST00000508529 1334 ntBASIC18.3■□□□□ 0.52
LBX1P52954 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LBX1P52954 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.3■□□□□ 0.52
LBX1P52954 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.3■□□□□ 0.52
LBX1P52954 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.3■□□□□ 0.52
LBX1P52954 RN7SL8P-201ENST00000461771 266 ntBASIC18.3■□□□□ 0.52
LBX1P52954 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.3■□□□□ 0.52
LBX1P52954 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
LBX1P52954 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.3■□□□□ 0.52
LBX1P52954 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
LBX1P52954 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LBX1P52954 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
LBX1P52954 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.3■□□□□ 0.52
LBX1P52954 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.29■□□□□ 0.52
LBX1P52954 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
LBX1P52954 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.29■□□□□ 0.52
LBX1P52954 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LBX1P52954 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LBX1P52954 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.29■□□□□ 0.52
LBX1P52954 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.29■□□□□ 0.52
LBX1P52954 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.29■□□□□ 0.52
LBX1P52954 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.29■□□□□ 0.52
LBX1P52954 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.29■□□□□ 0.52
LBX1P52954 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 AP001065.2-201ENST00000617205 644 ntBASIC18.29■□□□□ 0.52
LBX1P52954 AL139011.1-202ENST00000642063 584 ntBASIC18.29■□□□□ 0.52
LBX1P52954 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.29■□□□□ 0.52
LBX1P52954 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.29■□□□□ 0.52
LBX1P52954 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LBX1P52954 AC008132.1-202ENST00000342005 1389 ntBASIC18.29■□□□□ 0.52
LBX1P52954 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.28■□□□□ 0.52
LBX1P52954 AC108860.2-201ENST00000562760 2183 ntBASIC18.28■□□□□ 0.52
LBX1P52954 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.28■□□□□ 0.52
LBX1P52954 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LBX1P52954 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
LBX1P52954 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.28■□□□□ 0.52
LBX1P52954 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.28■□□□□ 0.52
LBX1P52954 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.28■□□□□ 0.52
LBX1P52954 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.28■□□□□ 0.52
LBX1P52954 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LBX1P52954 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.28■□□□□ 0.52
LBX1P52954 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.28■□□□□ 0.52
LBX1P52954 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.28■□□□□ 0.52
LBX1P52954 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LBX1P52954 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.28■□□□□ 0.52
LBX1P52954 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.28■□□□□ 0.52
LBX1P52954 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LBX1P52954 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.28■□□□□ 0.52
LBX1P52954 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LBX1P52954 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC18.27■□□□□ 0.52
LBX1P52954 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms