Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NEK3P51956 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.06■□□□□ 0.32
NEK3P51956 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NEK3P51956 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
NEK3P51956 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEK3P51956 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.05■□□□□ 0.32
NEK3P51956 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.05■□□□□ 0.32
NEK3P51956 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.05■□□□□ 0.32
NEK3P51956 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.05■□□□□ 0.32
NEK3P51956 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.05■□□□□ 0.32
NEK3P51956 FAM58CP-201ENST00000435741 640 ntBASIC17.05■□□□□ 0.32
NEK3P51956 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
NEK3P51956 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.05■□□□□ 0.32
NEK3P51956 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.05■□□□□ 0.32
NEK3P51956 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.05■□□□□ 0.32
NEK3P51956 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.05■□□□□ 0.32
NEK3P51956 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.05■□□□□ 0.32
NEK3P51956 AL645728.2-201ENST00000641974 660 ntBASIC17.05■□□□□ 0.32
NEK3P51956 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.05■□□□□ 0.32
NEK3P51956 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEK3P51956 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 ELL2P1-201ENST00000413990 1906 ntBASIC17.04■□□□□ 0.32
NEK3P51956 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.04■□□□□ 0.32
NEK3P51956 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.04■□□□□ 0.32
NEK3P51956 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.04■□□□□ 0.32
NEK3P51956 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.04■□□□□ 0.32
NEK3P51956 AP006288.1-201ENST00000446065 395 ntBASIC17.04■□□□□ 0.32
NEK3P51956 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 AP002490.2-201ENST00000524791 560 ntBASIC17.04■□□□□ 0.32
NEK3P51956 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.04■□□□□ 0.32
NEK3P51956 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
NEK3P51956 AC005412.3-201ENST00000580309 715 ntBASIC17.04■□□□□ 0.32
NEK3P51956 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.04■□□□□ 0.32
NEK3P51956 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 AC091812.2-201ENST00000619081 385 ntBASIC17.04■□□□□ 0.32
NEK3P51956 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NEK3P51956 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.04■□□□□ 0.32
NEK3P51956 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEK3P51956 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.03■□□□□ 0.32
NEK3P51956 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.03■□□□□ 0.32
NEK3P51956 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.03■□□□□ 0.32
NEK3P51956 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.03■□□□□ 0.32
NEK3P51956 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEK3P51956 ACTG1P14-201ENST00000446382 1122 ntBASIC17.03■□□□□ 0.32
NEK3P51956 CEND1P1-201ENST00000451006 455 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms