Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CR1P49238 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.57□□□□□ -0.08
CX3CR1P49238 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.57□□□□□ -0.08
CX3CR1P49238 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CX3CR1P49238 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CR1P49238 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CR1P49238 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CR1P49238 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CX3CR1P49238 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CR1P49238 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.56□□□□□ -0.08
CX3CR1P49238 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.56□□□□□ -0.08
CX3CR1P49238 MRPL20P1-201ENST00000400819 433 ntBASIC14.56□□□□□ -0.08
CX3CR1P49238 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.56□□□□□ -0.08
CX3CR1P49238 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 AC012640.2-201ENST00000561606 901 ntBASIC14.56□□□□□ -0.08
CX3CR1P49238 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.56□□□□□ -0.08
CX3CR1P49238 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
CX3CR1P49238 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.56□□□□□ -0.08
CX3CR1P49238 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.56□□□□□ -0.08
CX3CR1P49238 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 AC126755.1-201ENST00000525846 6405 ntBASIC14.56□□□□□ -0.08
CX3CR1P49238 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CX3CR1P49238 MTHFR-217ENST00000641820 1569 ntBASIC14.56□□□□□ -0.08
CX3CR1P49238 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.55□□□□□ -0.08
CX3CR1P49238 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.55□□□□□ -0.08
CX3CR1P49238 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CX3CR1P49238 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CX3CR1P49238 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms