Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.51□□□□□ -0.25
CEACAM3P40198 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CEACAM3P40198 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 MCCD1P2-201ENST00000423228 335 ntBASIC13.51□□□□□ -0.25
CEACAM3P40198 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CEACAM3P40198 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.51□□□□□ -0.25
CEACAM3P40198 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CEACAM3P40198 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.51□□□□□ -0.25
CEACAM3P40198 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CEACAM3P40198 AL513190.1-201ENST00000621254 727 ntBASIC13.51□□□□□ -0.25
CEACAM3P40198 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CEACAM3P40198 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.51□□□□□ -0.25
CEACAM3P40198 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CEACAM3P40198 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.51□□□□□ -0.25
CEACAM3P40198 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 AC078925.2-201ENST00000624013 1973 ntBASIC13.51□□□□□ -0.25
CEACAM3P40198 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CEACAM3P40198 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CEACAM3P40198 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CEACAM3P40198 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.5□□□□□ -0.25
CEACAM3P40198 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.5□□□□□ -0.25
CEACAM3P40198 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 ACTG1P14-201ENST00000446382 1122 ntBASIC13.5□□□□□ -0.25
CEACAM3P40198 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.5□□□□□ -0.25
CEACAM3P40198 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.5□□□□□ -0.25
CEACAM3P40198 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.5□□□□□ -0.25
CEACAM3P40198 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.5□□□□□ -0.25
CEACAM3P40198 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CEACAM3P40198 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CEACAM3P40198 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.5□□□□□ -0.25
CEACAM3P40198 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CEACAM3P40198 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms