Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TPM3P06753 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TPM3P06753 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM3P06753 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM3P06753 KRT18P57-201ENST00000443599 1254 ntBASIC18.59■□□□□ 0.57
TPM3P06753 NUS1P1-201ENST00000446295 882 ntBASIC18.59■□□□□ 0.57
TPM3P06753 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.59■□□□□ 0.57
TPM3P06753 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
TPM3P06753 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM3P06753 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.59■□□□□ 0.57
TPM3P06753 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM3P06753 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TPM3P06753 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.59■□□□□ 0.57
TPM3P06753 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM3P06753 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
TPM3P06753 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM3P06753 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM3P06753 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.58■□□□□ 0.57
TPM3P06753 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.58■□□□□ 0.57
TPM3P06753 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.58■□□□□ 0.57
TPM3P06753 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM3P06753 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM3P06753 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TPM3P06753 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TPM3P06753 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM3P06753 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM3P06753 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.58■□□□□ 0.57
TPM3P06753 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TPM3P06753 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM3P06753 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.58■□□□□ 0.57
TPM3P06753 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM3P06753 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM3P06753 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.58■□□□□ 0.56
TPM3P06753 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.58■□□□□ 0.56
TPM3P06753 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.58■□□□□ 0.56
TPM3P06753 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM3P06753 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.58■□□□□ 0.56
TPM3P06753 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TPM3P06753 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM3P06753 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 AC006277.1-201ENST00000624348 1610 ntBASIC18.58■□□□□ 0.56
TPM3P06753 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
TPM3P06753 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 PMPCAP1-201ENST00000508114 1576 ntBASIC18.58■□□□□ 0.56
TPM3P06753 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TPM3P06753 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM3P06753 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM3P06753 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 TP73-AS1-210ENST00000637775 1455 ntBASIC18.58■□□□□ 0.56
TPM3P06753 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM3P06753 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TPM3P06753 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.57■□□□□ 0.56
TPM3P06753 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM3P06753 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM3P06753 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM3P06753 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM3P06753 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.57■□□□□ 0.56
TPM3P06753 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 AC093827.2-201ENST00000512654 315 ntBASIC18.57■□□□□ 0.56
TPM3P06753 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.57■□□□□ 0.56
TPM3P06753 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.57■□□□□ 0.56
TPM3P06753 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM3P06753 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM3P06753 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TPM3P06753 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TPM3P06753 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.57■□□□□ 0.56
TPM3P06753 PPT1-215ENST00000641471 2368 ntBASIC18.57■□□□□ 0.56
TPM3P06753 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TPM3P06753 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM3P06753 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms