Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
OPN1SWP03999 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
OPN1SWP03999 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
OPN1SWP03999 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
OPN1SWP03999 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
OPN1SWP03999 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
OPN1SWP03999 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
OPN1SWP03999 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.48■□□□□ 0.07
OPN1SWP03999 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 HCG4P8-203ENST00000443049 980 ntBASIC15.48■□□□□ 0.07
OPN1SWP03999 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.48■□□□□ 0.07
OPN1SWP03999 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 MIR3652-201ENST00000579335 131 ntBASIC15.48■□□□□ 0.07
OPN1SWP03999 AC091167.2-201ENST00000579581 588 ntBASIC15.48■□□□□ 0.07
OPN1SWP03999 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.48■□□□□ 0.07
OPN1SWP03999 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 GPAA1P2-202ENST00000606848 1787 ntBASIC15.48■□□□□ 0.07
OPN1SWP03999 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 PRAL-201ENST00000624952 3286 ntBASIC15.48■□□□□ 0.07
OPN1SWP03999 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.48■□□□□ 0.07
OPN1SWP03999 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 AP002414.2-201ENST00000591780 3365 ntBASIC15.48■□□□□ 0.07
OPN1SWP03999 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
OPN1SWP03999 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.47■□□□□ 0.07
OPN1SWP03999 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 UPK3BP1-201ENST00000428678 509 ntBASIC15.47■□□□□ 0.07
OPN1SWP03999 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.47■□□□□ 0.07
OPN1SWP03999 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 AC107918.2-201ENST00000530817 355 ntBASIC15.47■□□□□ 0.07
OPN1SWP03999 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.47■□□□□ 0.07
OPN1SWP03999 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
OPN1SWP03999 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 AC025062.2-201ENST00000605477 670 ntBASIC15.47■□□□□ 0.07
OPN1SWP03999 AL121772.3-201ENST00000610840 674 ntBASIC15.47■□□□□ 0.07
OPN1SWP03999 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 AF228730.7-201ENST00000641842 219 ntBASIC15.47■□□□□ 0.07
OPN1SWP03999 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.47■□□□□ 0.07
OPN1SWP03999 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.47■□□□□ 0.07
OPN1SWP03999 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 DBET-201ENST00000630918 3363 ntBASIC15.47■□□□□ 0.07
OPN1SWP03999 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
OPN1SWP03999 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
OPN1SWP03999 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms