Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLIC3O95833 RNF126P1-202ENST00000569893 925 ntBASIC15.32■□□□□ 0.04
CLIC3O95833 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.32■□□□□ 0.04
CLIC3O95833 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.32■□□□□ 0.04
CLIC3O95833 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CLIC3O95833 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.32■□□□□ 0.04
CLIC3O95833 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.32■□□□□ 0.04
CLIC3O95833 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CLIC3O95833 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC3O95833 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.32■□□□□ 0.04
CLIC3O95833 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.32■□□□□ 0.04
CLIC3O95833 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CLIC3O95833 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLIC3O95833 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.31■□□□□ 0.04
CLIC3O95833 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLIC3O95833 AC104581.4-201ENST00000623126 3052 ntBASIC15.31■□□□□ 0.04
CLIC3O95833 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLIC3O95833 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC3O95833 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 AC211429.1-201ENST00000415277 523 ntBASIC15.31■□□□□ 0.04
CLIC3O95833 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC3O95833 NUS1P1-201ENST00000446295 882 ntBASIC15.31■□□□□ 0.04
CLIC3O95833 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 AC140113.3-201ENST00000605663 199 ntBASIC15.31■□□□□ 0.04
CLIC3O95833 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLIC3O95833 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 PKD1P5-201ENST00000532415 10291 ntBASIC15.31■□□□□ 0.04
CLIC3O95833 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLIC3O95833 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLIC3O95833 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLIC3O95833 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC3O95833 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.31■□□□□ 0.04
CLIC3O95833 AL109954.1-202ENST00000564051 2148 ntBASIC15.31■□□□□ 0.04
CLIC3O95833 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC3O95833 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.31■□□□□ 0.04
CLIC3O95833 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLIC3O95833 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC3O95833 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 AP002414.1-201ENST00000391405 1147 ntBASIC15.3■□□□□ 0.04
CLIC3O95833 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.3■□□□□ 0.04
CLIC3O95833 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC3O95833 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.3■□□□□ 0.04
CLIC3O95833 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC3O95833 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.3■□□□□ 0.04
CLIC3O95833 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.3■□□□□ 0.04
CLIC3O95833 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.3■□□□□ 0.04
CLIC3O95833 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.3■□□□□ 0.04
CLIC3O95833 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.3■□□□□ 0.04
CLIC3O95833 AL359258.3-201ENST00000622910 2331 ntBASIC15.3■□□□□ 0.04
CLIC3O95833 AC133561.5-201ENST00000635547 218 ntBASIC15.3■□□□□ 0.04
CLIC3O95833 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLIC3O95833 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLIC3O95833 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.3■□□□□ 0.04
CLIC3O95833 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLIC3O95833 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC3O95833 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.29■□□□□ 0.04
CLIC3O95833 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC3O95833 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CLIC3O95833 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC3O95833 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLIC3O95833 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.29■□□□□ 0.04
CLIC3O95833 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLIC3O95833 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CLIC3O95833 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms