Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCNKO75909 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.38□□□□□ -0.11
CCNKO75909 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 KRT8P47-201ENST00000604727 1398 ntBASIC14.37□□□□□ -0.11
CCNKO75909 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.37□□□□□ -0.11
CCNKO75909 HLA-J-202ENST00000469281 1241 ntBASIC14.37□□□□□ -0.11
CCNKO75909 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 AC009090.5-201ENST00000624886 2285 ntBASIC14.37□□□□□ -0.11
CCNKO75909 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CCNKO75909 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.37□□□□□ -0.11
CCNKO75909 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.37□□□□□ -0.11
CCNKO75909 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.37□□□□□ -0.11
CCNKO75909 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CCNKO75909 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNKO75909 AC016027.1-202ENST00000607927 1699 ntBASIC14.36□□□□□ -0.11
CCNKO75909 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNKO75909 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNKO75909 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNKO75909 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCNKO75909 HOXB1-202ENST00000577092 1414 ntBASIC14.36□□□□□ -0.11
CCNKO75909 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CCNKO75909 AL355802.2-201ENST00000402069 882 ntBASIC14.36□□□□□ -0.11
CCNKO75909 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CCNKO75909 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNKO75909 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNKO75909 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.36□□□□□ -0.11
CCNKO75909 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.36□□□□□ -0.11
CCNKO75909 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CCNKO75909 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CCNKO75909 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNKO75909 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.36□□□□□ -0.11
CCNKO75909 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNKO75909 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 AP003680.1-201ENST00000598970 3660 ntBASIC14.36□□□□□ -0.11
CCNKO75909 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms